STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TK90_0144PFAM: molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; KEGG: aeh:Mlg_1675 molybdopterin oxidoreductase Fe4s4 region; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (968 aa)    
Predicted Functional Partners:
TK90_0145
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tbd:Tbd_0571 DMSO reductase chain B.
 
 
 0.982
TK90_0058
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: har:HEAR3343 putative iron-sulfur cluster-binding protein (partial).
 
 
 0.959
TK90_0146
PFAM: DMSO reductase anchor subunit (DmsC); KEGG: tbd:Tbd_0572 DMSO reductase chain C.
 
 
 0.917
TK90_0057
PFAM: DMSO reductase anchor subunit (DmsC); KEGG: har:HEAR3344 hypothetical protein.
 
 
 0.834
TK90_1761
PFAM: Cytochrome c-552/DMSO reductase-like, haem-binding domain; SMART: Cytochrome c-552/DMSO reductase-like, haem-binding domain; KEGG: hha:Hhal_2278 hypothetical protein.
  
 
 0.804
TK90_0687
KEGG: vpa:VPA1144 hypothetical protein.
   
 
 0.751
TK90_0265
PFAM: glutamate synthase; ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase alpha subunit domain protein; KEGG: aeh:Mlg_2763 glutamate synthase subunit alpha.
  
 
 0.723
tuf
Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.590
TK90_2183
TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: aeh:Mlg_0456 elongation factor Tu.
   
 
 0.590
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
     
 0.543
Your Current Organism:
Thioalkalivibrio sp. K90mix
NCBI taxonomy Id: 396595
Other names: T. sp. K90mix
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