Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
TK90_1007PFAM: Invasion associated locus B family protein; KEGG: oan:Oant_0441 invasion associated locus B family protein. (176 aa)    
Predicted Functional Partners:
TK90_0999
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: noc:Noc_1279 NADH/ubiquinone/plastoquinone (complex I).
       0.664
TK90_1000
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: psa:PST_0384 putative NADH dehydrogenase I chain M.
       0.664
TK90_1001
PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: noc:Noc_1281 NADH dehydrogenase (quinone).
       0.664
TK90_1002
PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: aeh:Mlg_0742 NADH-ubiquinone oxidoreductase, chain 4L.
       0.664
TK90_1003
PFAM: Na+/H+ antiporter MnhB subunit-related protein; KEGG: hha:Hhal_0815 hypothetical protein.
       0.664
TK90_1004
PFAM: Na+/H+ antiporter subunit; KEGG: sfr:Sfri_2737 putative monovalent cation/H+ antiporter subunit G.
       0.664
TK90_1005
PFAM: multiple resistance and pH regulation protein F; KEGG: noc:Noc_1286 multiple resistance and pH regulation protein F.
       0.664
TK90_1006
PFAM: cation antiporter; KEGG: psa:PST_0378 hypothetical protein.
       0.664
TK90_0674
PFAM: high-affinity nickel-transporter; KEGG: sme:SMc02986 hypothetical protein; Belongs to the NiCoT transporter (TC 2.A.52) family.
  
     0.606
TK90_1008
KEGG: mms:mma_3343 hypothetical protein.
 
     0.568
Your Current Organism:
Thioalkalivibrio sp. K90mix
NCBI taxonomy Id: 396595
Other names: T. sp. K90mix
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