Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
Experiments
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[Homology]
Score
TK90_1237Hypothetical protein; KEGG: tmz:Tmz1t_0787 sulfate transporter/antisigma-factor antagonist STAS. (89 aa)    
Predicted Functional Partners:
TK90_1238
PFAM: DNA packaging Nu1; KEGG: nwi:Nwi_0811 hypothetical protein.
       0.538
TK90_1239
Hypothetical protein; KEGG: svi:Svir_12710 methylase involved in ubiquinone/menaquinone biosynthesis.
       0.538
TK90_1236
KEGG: rsp:RSP_2756 hypothetical protein.
       0.408
Your Current Organism:
Thioalkalivibrio sp. K90mix
NCBI taxonomy Id: 396595
Other names: T. sp. K90mix
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