Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TK90_2011PFAM: Transglycosylase-associated protein; KEGG: pde:Pden_0805 transglycosylase-associated protein. (85 aa)    
Predicted Functional Partners:
TK90_2012
KEGG: aeh:Mlg_1770 membrane protein.
       0.693
TK90_0941
TIGRFAM: methyltransferase; PFAM: Protein of unknown function DUF2260; KEGG: mxa:MXAN_7473 hypothetical protein.
   
    0.608
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
       0.584
TK90_2009
TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP; KEGG: aeh:Mlg_2441 endoribonuclease L-PSP.
       0.542
TK90_2013
PFAM: membrane protein involved in aromatic hydrocarbon degradation; KEGG: tbd:Tbd_2596 long chain fatty acid transport protein.
       0.424
TK90_1391
PFAM: CsbD family protein; KEGG: eba:ebB174 hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.417
TK90_1860
KEGG: prw:PsycPRwf_0316 CsbD family protein; Belongs to the UPF0337 (CsbD) family.
  
    0.417
Your Current Organism:
Thioalkalivibrio sp. K90mix
NCBI taxonomy Id: 396595
Other names: T. sp. K90mix
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.