STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TK90_2511TIGRFAM: FemAB-related protein, PEP-CTERM system-associated; KEGG: aeh:Mlg_0142 hypothetical protein. (356 aa)    
Predicted Functional Partners:
TK90_2510
TIGRFAM: polysaccharide deactylase family protein, PEP-CTERM locus subfamily; PFAM: polysaccharide deacetylase; KEGG: aeh:Mlg_0143 polysaccharide deacetylase.
 
     0.962
TK90_2508
TIGRFAM: PEP-CTERM system associated protein; KEGG: aeh:Mlg_0145 hypothetical protein.
 
     0.946
TK90_2507
KEGG: aeh:Mlg_0146 hypothetical protein.
 
     0.943
TK90_2509
TIGRFAM: secretion ATPase, PEP-CTERM locus subfamily; SMART: AAA ATPase; KEGG: aeh:Mlg_0144 AAA ATPase.
 
     0.942
TK90_2512
TIGRFAM: sugar transferase, PEP-CTERM/EpsH1 system associated; PFAM: glycosyl transferase group 1; KEGG: aeh:Mlg_0141 glycosyl transferase, group 1.
 
     0.937
TK90_2513
TIGRFAM: exosortase 1; eight transmembrane protein EpsH; EpsI family protein; PFAM: Exosortase EpsH-related; KEGG: aeh:Mlg_0140 eight transmembrane protein EpsH.
 
     0.937
TK90_2514
TIGRFAM: sugar transferase, PEP-CTERM/EpsH1 system associated; PFAM: glycosyl transferase group 1; KEGG: aeh:Mlg_0139 glycosyl transferase, group 1.
 
     0.935
TK90_2517
PFAM: glycosyl transferase group 1; KEGG: aeh:Mlg_0137 glycosyl transferase, group 1.
 
     0.925
TK90_2506
TIGRFAM: polysaccharide chain length determinant protein, PEP-CTERM locus subfamily; PFAM: lipopolysaccharide biosynthesis protein; KEGG: aeh:Mlg_0147 lipopolysaccharide biosynthesis.
 
     0.909
TK90_2518
PFAM: glycosyl transferase group 1; KEGG: aeh:Mlg_0136 glycosyl transferase, group 1.
 
     0.909
Your Current Organism:
Thioalkalivibrio sp. K90mix
NCBI taxonomy Id: 396595
Other names: T. sp. K90mix
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.