STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIHG_01572Uncharacterized protein. (258 aa)    
Predicted Functional Partners:
CIHG_00904
Pre-mRNA-processing protein 45.
    
 0.993
CIHG_07143
Ubiquitin-protein ligase E4.
    
 0.993
CIHG_08648
Pre-mRNA-splicing factor clf1.
   
 
 0.991
CIHG_05705
Pre-mRNA-splicing factor syf1.
    
 0.990
CIHG_03867
Pre-mRNA-splicing factor isy1.
    
  0.988
CIHG_00750
Cell cycle control protein cwf14.
     
 0.981
CIHG_06854
Pre-mRNA processing splicing factor 8.
    
   0.923
CIHG_00717
Spliceosome associated protein 145.
    
   0.922
CIHG_01281
KH domain RNA binding protein.
    
   0.847
CIHG_09115
Aquarius protein.
    
 0.824
Your Current Organism:
Coccidioides immitis H5384
NCBI taxonomy Id: 396776
Other names: C. immitis H538.4, Coccidioides immitis H538.4
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.