STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIHG_02732Ribosome biogenesis protein BRX1. (370 aa)    
Predicted Functional Partners:
CIHG_07030
rRNA processing protein Ebp2.
   
 
 0.989
CIHG_04710
MKI67 FHA domain-interacting nucleolar phosphoprotein.
   
 
 0.988
CIHG_03366
Nip7p.
   
 
 0.988
CIHG_01952
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.986
CIHG_02688
U3 small nucleolar ribonucleoprotein IMP4.
   
 
 0.986
CIHG_00078
Nucleolar complex protein 2.
   
 
 0.985
CIHG_10039
Uncharacterized protein.
   
 
 0.985
CIHG_04043
Uncharacterized protein.
   
 
 0.982
CIHG_07147
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.981
CIHG_00763
tRNA (Cytosine-5-)-methyltransferase NCL1; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
 
 0.980
Your Current Organism:
Coccidioides immitis H5384
NCBI taxonomy Id: 396776
Other names: C. immitis H538.4, Coccidioides immitis H538.4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.