STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIHG_05059NIF domain-containing protein. (517 aa)    
Predicted Functional Partners:
CIHG_00290
Nuclear elongation and deformation protein 1.
    
 0.974
CIHG_03703
Uncharacterized protein.
    
 0.947
CIHG_08375
Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family.
    
 0.912
CIHG_08133
Uncharacterized protein.
    
 0.873
CIHG_08932
Mitochondrial import inner membrane translocase subunit tim23.
    
 0.806
CIHG_07643
RNA polymerase II subunit 7.
    
 0.794
CIHG_09054
Import inner membrane translocase subunit tim-21.
    
 0.785
CIHG_10466
Transcription initiation factor IIF subunit beta.
    
 0.778
CIHG_07249
DNA-directed RNA polymerase II subunit RPB4.
    
 0.776
CIHG_04836
Mitochondrial import inner membrane translocase subunit tim-17.
   
 0.775
Your Current Organism:
Coccidioides immitis H5384
NCBI taxonomy Id: 396776
Other names: C. immitis H538.4, Coccidioides immitis H538.4
Server load: low (18%) [HD]