STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIHG_06818RNA binding motif protein 8A. (156 aa)    
Predicted Functional Partners:
CIHG_04040
Mago nashi.
   
 0.999
CIHG_01328
Mago-bind domain-containing protein.
    
 0.997
CIHG_00841
ATP-dependent RNA helicase fal1.
   
 0.997
CIHG_08410
RRM domain-containing protein.
   
 0.985
CIHG_03175
Nuclear cap-binding protein subunit 2.
   
0.981
CIHG_06301
ATP-dependent RNA helicase SUB2.
   
 0.980
CIHG_06808
Nucleoporin p62.
   
 
  0.980
CIHG_08267
RRM domain-containing protein.
   
 0.979
CIHG_02229
Pre-mRNA-splicing factor slu7.
   
 0.970
CIHG_03929
DNA-binding protein SMUBP-2.
    
 0.964
Your Current Organism:
Coccidioides immitis H5384
NCBI taxonomy Id: 396776
Other names: C. immitis H538.4, Coccidioides immitis H538.4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.