STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIHG_07865ISWI chromatin-remodeling complex ATPase ISW2. (1118 aa)    
Predicted Functional Partners:
CIHG_10182
DNA mismatch repair protein MSH2.
   
 
 0.828
CIHG_04826
Exonuclease.
    
 
 0.724
CIHG_08581
Uncharacterized protein.
  
   0.675
CIHG_07990
DNA mismatch repair protein mutS.
   
 
 0.652
CIHG_01060
BRCT domain-containing protein.
   
 
 0.548
CIHG_03318
Rad4.
   
 
 0.516
CIHG_01276
ATP-dependent DNA helicase recQ.
   
 
 0.503
CIHG_06605
ATP-dependent DNA helicase recQ.
   
 
 0.503
CIHG_01275
ATP-dependent DNA helicase hus2/rqh1.
   
 
 0.503
CIHG_02398
ISWI chromatin-remodeling complex ATPase ISW2.
  
  
0.502
Your Current Organism:
Coccidioides immitis H5384
NCBI taxonomy Id: 396776
Other names: C. immitis H538.4, Coccidioides immitis H538.4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.