STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIHG_07286Uncharacterized protein. (204 aa)    
Predicted Functional Partners:
CIHG_00413
DNA-directed RNA polymerases I.
    
 0.832
CIHG_06000
Uncharacterized protein.
    
 0.832
CIHG_08832
DNA-directed RNA polymerases I.
    
 0.832
CIHG_03802
DNA-directed RNA polymerase II subunit RPB3.
    
 0.831
CIHG_03181
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.
    
 0.831
CIHG_04853
DNA-directed RNA polymerases N/8 kDa subunit superfamily protein.
    
 0.831
CIHG_07372
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
 0.831
CIHG_07249
DNA-directed RNA polymerase II subunit RPB4.
    
 0.831
CIHG_07643
RNA polymerase II subunit 7.
    
 0.831
CIHG_09289
RNA_pol_L_2 domain-containing protein.
    
 0.831
Your Current Organism:
Coccidioides immitis H5384
NCBI taxonomy Id: 396776
Other names: C. immitis H538.4, Coccidioides immitis H538.4
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