STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIHG_07420Uncharacterized protein. (392 aa)    
Predicted Functional Partners:
CIHG_02229
Pre-mRNA-splicing factor slu7.
   
 
  0.820
CIHG_01757
WD repeat-containing protein 5B.
   
 
  0.791
CIHG_08267
RRM domain-containing protein.
   
  0.737
CIHG_09357
Uncharacterized protein.
    
  0.716
CIHG_04237
Pre-mRNA-splicing factor cwc22.
    
  0.702
CIHG_00537
Uncharacterized protein.
   
 
  0.685
CIHG_05763
Sde2_N_Ubi domain-containing protein.
     
 0.671
CIHG_02320
Pre-mRNA-splicing factor CWC25.
   
 
  0.652
CIHG_03075
Pre-mRNA-splicing factor ATP-dependent RNA helicase prp22.
    
  0.647
CIHG_05083
Pre-mRNA-splicing factor ATP-dependent RNA helicase prp16.
    
  0.647
Your Current Organism:
Coccidioides immitis H5384
NCBI taxonomy Id: 396776
Other names: C. immitis H538.4, Coccidioides immitis H538.4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.