STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIHG_08679WD repeat-containing protein. (1440 aa)    
Predicted Functional Partners:
CIHG_01966
Nucleoporin seh1; Belongs to the WD repeat SEC13 family.
    
 0.997
CIHG_03615
Tumor suppressor candidate 4.
    
 0.997
CIHG_07583
cDNA sequence.
    
 0.997
CIHG_08604
Uncharacterized protein.
  
 
 0.997
CIHG_03052
DEP domain-containing protein.
   
 0.997
CIHG_06846
Uncharacterized protein.
    
 0.974
CIHG_06845
WD repeat-containing protein 24.
    
0.974
CIHG_07053
Mitochondrial proteinase 1.
    
 0.968
CIHG_00887
Methyltranfer_dom domain-containing protein.
    
 0.872
CIHG_01077
GTP-binding protein GTR1.
     
 0.827
Your Current Organism:
Coccidioides immitis H5384
NCBI taxonomy Id: 396776
Other names: C. immitis H538.4, Coccidioides immitis H538.4
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.