STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CIHG_10102Uncharacterized protein. (135 aa)    
Predicted Functional Partners:
CIHG_03585
Phosphatase 1 regulatory subunit SDS22.
    
 0.737
CIHG_00898
Uncharacterized protein.
    
 0.733
CIHG_03960
Uncharacterized protein.
    
 0.733
CIHG_04053
Uncharacterized protein.
    
 0.733
CIHG_07386
U2 small nuclear ribonucleoprotein A.
    
 0.733
CIHG_06600
Uncharacterized protein.
    
 0.733
CIHG_08066
Leucine Rich Repeat domain-containing protein.
    
 0.733
CIHG_09102
Conserved leucine-rich repeat-containing protein.
    
 0.733
CIHG_09101
Leucine-rich repeat-containing protein 40.
    
 0.733
CIHG_07480
Conserved leucine-rich repeat-containing protein.
    
 0.733
Your Current Organism:
Coccidioides immitis H5384
NCBI taxonomy Id: 396776
Other names: C. immitis H538.4, Coccidioides immitis H538.4
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