Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ORB25412.1AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology. (486 aa)    
Predicted Functional Partners:
ORB26782.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.892
ORB25518.1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.868
ORB25410.1
AMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.861
ORB25411.1
AMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.861
ORB25413.1
Crotonase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.846
ORB19836.1
Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.822
ORB14577.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.822
ORB25414.1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   0.798
ORB26906.1
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.774
ORB16477.1
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.757
Your Current Organism:
Mycolicibacterium moriokaense
NCBI taxonomy Id: 39691
Other names: ATCC 43059, CCUG 37671, CIP 105393, DSM 44221, JCM 6375, M. moriokaense, Mycobacterium moriokaense, NCH E11715
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