STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB24857.1CAAX protease family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (253 aa)    
Predicted Functional Partners:
ORB24948.1
Phosphoketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.803
ORB20100.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.690
ORB27122.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.652
ORB19827.1
Lysine 6-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.648
ORB21548.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.645
ORB20944.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.620
ORB24950.1
CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.616
ORB26516.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
      
 0.596
ORB27261.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.564
ORB23517.1
Alpha-(1-2)-phosphatidylinositol mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.562
Your Current Organism:
Mycolicibacterium moriokaense
NCBI taxonomy Id: 39691
Other names: ATCC 43059, CCUG 37671, CIP 105393, DSM 44221, JCM 6375, M. moriokaense, Mycobacterium moriokaense, NCH E11715
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.