Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
ORB44482.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)    
Predicted Functional Partners:
ORB37819.1
Glycoside hydrolase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 1 family.
   
 0.831
ORB37296.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.831
ORB41807.1
Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.798
ORB40569.1
GDSL family lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.798
ORB37118.1
Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.798
ORB34733.1
Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.798
ORB34453.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.798
ORB33767.1
SGNH/GDSL hydrolase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.798
ORB42769.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
 
 0.644
ORB43644.1
UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.588
Your Current Organism:
Mycolicibacterium porcinum
NCBI taxonomy Id: 39693
Other names: ATCC 33776, CCUG 37674, CIP 105392, DSM 44242, JCM 6378, M. porcinum, Mycobacterium porcinum, strain E10241-1
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