STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORB44546.1Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (235 aa)    
Predicted Functional Partners:
ORB43522.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.816
guaA
GMP synthetase; Catalyzes the synthesis of GMP from XMP.
  
 
 0.729
ORB44644.1
PTS mannose transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.709
ORB37409.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.687
ORB34119.1
Trehalose-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
    
 0.677
pgi
Glucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family.
  
 0.657
ORB45057.1
Family 65 glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.655
ORB41436.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.623
ORB38972.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.623
ORB37514.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.623
Your Current Organism:
Mycolicibacterium porcinum
NCBI taxonomy Id: 39693
Other names: ATCC 33776, CCUG 37674, CIP 105392, DSM 44242, JCM 6378, M. porcinum, Mycobacterium porcinum, strain E10241-1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.