STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB44618.1Carboxymuconolactone decarboxylase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (200 aa)    
Predicted Functional Partners:
ORB42752.1
4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.781
ORB44616.1
enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ORB44617.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ORB44619.1
AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ORB44620.1
NADPH:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ORB44621.1
Cholesterol oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ORB44622.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ORB35546.1
Carboxymuconolactone decarboxylase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.759
ORB36941.1
Carboxymuconolactone decarboxylase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.674
ORB35219.1
Carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.626
Your Current Organism:
Mycolicibacterium porcinum
NCBI taxonomy Id: 39693
Other names: ATCC 33776, CCUG 37674, CIP 105392, DSM 44242, JCM 6378, M. porcinum, Mycobacterium porcinum, strain E10241-1
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