STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB42558.1CbbQ/NirQ/NorQ/GpvN family protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)    
Predicted Functional Partners:
ORB42557.1
MorD protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.982
ORB35512.1
Nitric oxide reductase activation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.836
ORB42559.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.664
ORB38153.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.561
ORB38891.1
Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.516
ORB38949.1
Decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.516
ORB42556.1
TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.503
ORB40688.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
    
 0.501
ORB42560.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.467
cobB-3
Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
     
 0.463
Your Current Organism:
Mycolicibacterium porcinum
NCBI taxonomy Id: 39693
Other names: ATCC 33776, CCUG 37674, CIP 105392, DSM 44242, JCM 6378, M. porcinum, Mycobacterium porcinum, strain E10241-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.