STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB41876.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron/ascorbate-dependent oxidoreductase family. (319 aa)    
Predicted Functional Partners:
ORB41878.1
Cytosine permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine-cytosine permease (2.A.39) family.
       0.886
ORB41877.1
tRNA-specific adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.848
ORB37409.1
Polyketide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.670
ORB33518.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.659
ORB33439.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.659
ORB41880.1
ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.597
ORB44899.1
fatty-acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.595
ORB41879.1
GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.594
ORB40785.1
Glutamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
  0.591
ORB41881.1
Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.586
Your Current Organism:
Mycolicibacterium porcinum
NCBI taxonomy Id: 39693
Other names: ATCC 33776, CCUG 37674, CIP 105392, DSM 44242, JCM 6378, M. porcinum, Mycobacterium porcinum, strain E10241-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.