STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB41924.1Copper-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (765 aa)    
Predicted Functional Partners:
ORB36704.1
Cation-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.975
ORB41926.1
Cation-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.766
prcA
Proteasome subunit alpha; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family.
     
 0.658
prcB
Proteasome subunit beta; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family.
     
 0.658
ORB36006.1
Oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.640
ORB41387.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.
    
 0.572
ORB36032.1
Magnesium-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.566
ORB41925.1
RNA polymerase subunit sigma; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.
       0.559
ORB42571.1
Magnesium-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.533
ORB42565.1
Magnesium-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
0.520
Your Current Organism:
Mycolicibacterium porcinum
NCBI taxonomy Id: 39693
Other names: ATCC 33776, CCUG 37674, CIP 105392, DSM 44242, JCM 6378, M. porcinum, Mycobacterium porcinum, strain E10241-1
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