STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORB41968.1Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (467 aa)    
Predicted Functional Partners:
ORB38627.1
Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
  0.688
ORB39450.1
Rhodanese-like domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.636
ORB39441.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.632
ORB34244.1
Copper resistance protein CopC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.632
ORB44503.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.607
ORB44934.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.606
ORB44631.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.557
ORB45044.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.557
ORB44789.1
Ferredoxin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.557
BST41_03255
Hydrolase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.557
Your Current Organism:
Mycolicibacterium porcinum
NCBI taxonomy Id: 39693
Other names: ATCC 33776, CCUG 37674, CIP 105392, DSM 44242, JCM 6378, M. porcinum, Mycobacterium porcinum, strain E10241-1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.