STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORB41140.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (674 aa)    
Predicted Functional Partners:
ORB41141.1
WXG100 family type VII secretion target; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.784
ORB41142.1
WXG100 family type VII secretion target; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.783
ORB36536.1
Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.738
ORB42683.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.605
ORB43670.1
ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.602
ORB39469.1
Thiol reductase thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.602
ORB37533.1
Thiol reductase thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.
    
 
 0.602
ORB34996.1
Co-chaperone YbbN; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 
 0.602
ORB44585.1
Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.524
ORB43595.1
Type VII secretion integral membrane protein EccD; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.524
Your Current Organism:
Mycolicibacterium porcinum
NCBI taxonomy Id: 39693
Other names: ATCC 33776, CCUG 37674, CIP 105392, DSM 44242, JCM 6378, M. porcinum, Mycobacterium porcinum, strain E10241-1
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.