Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ORB33878.1 | ORB40514.1 | BST41_32470 | BST41_12875 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.747 |
| ORB33878.1 | glsA | BST41_32470 | BST41_29755 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family. | 0.801 |
| ORB33878.1 | murD | BST41_32470 | BST41_19925 | Derived by automated computational analysis using gene prediction method: Protein Homology. | UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.870 |
| ORB33878.1 | murI | BST41_32470 | BST41_29640 | Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.878 |
| ORB40513.1 | ORB40514.1 | BST41_12870 | BST41_12875 | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.808 |
| ORB40514.1 | ORB33878.1 | BST41_12875 | BST41_32470 | Hypothetical protein; Provides the (R)-glutamate required for cell wall biosynthesis. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.747 |
| ORB40514.1 | ORB40513.1 | BST41_12875 | BST41_12870 | Hypothetical protein; Provides the (R)-glutamate required for cell wall biosynthesis. | Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.808 |
| ORB40514.1 | cysM | BST41_12875 | BST41_29650 | Hypothetical protein; Provides the (R)-glutamate required for cell wall biosynthesis. | Cysteine synthase B; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.733 |
| ORB40514.1 | glsA | BST41_12875 | BST41_29755 | Hypothetical protein; Provides the (R)-glutamate required for cell wall biosynthesis. | Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family. | 0.762 |
| ORB40514.1 | guaA | BST41_12875 | BST41_01970 | Hypothetical protein; Provides the (R)-glutamate required for cell wall biosynthesis. | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | 0.742 |
| ORB40514.1 | murC | BST41_12875 | BST41_19910 | Hypothetical protein; Provides the (R)-glutamate required for cell wall biosynthesis. | UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation; Belongs to the MurCDEF family. | 0.753 |
| ORB40514.1 | murD | BST41_12875 | BST41_19925 | Hypothetical protein; Provides the (R)-glutamate required for cell wall biosynthesis. | UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.951 |
| ORB40514.1 | murE | BST41_12875 | BST41_19940 | Hypothetical protein; Provides the (R)-glutamate required for cell wall biosynthesis. | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.746 |
| ORB40514.1 | murF | BST41_12875 | BST41_19935 | Hypothetical protein; Provides the (R)-glutamate required for cell wall biosynthesis. | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily. | 0.798 |
| ORB40514.1 | murI | BST41_12875 | BST41_29640 | Hypothetical protein; Provides the (R)-glutamate required for cell wall biosynthesis. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.771 |
| cysM | ORB40514.1 | BST41_29650 | BST41_12875 | Cysteine synthase B; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology. | Hypothetical protein; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.733 |
| cysM | guaA | BST41_29650 | BST41_01970 | Cysteine synthase B; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology. | GMP synthetase; Catalyzes the synthesis of GMP from XMP. | 0.545 |
| cysM | murI | BST41_29650 | BST41_29640 | Cysteine synthase B; Catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.920 |
| glsA | ORB33878.1 | BST41_29755 | BST41_32470 | Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family. | Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.801 |
| glsA | ORB40514.1 | BST41_29755 | BST41_12875 | Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family. | Hypothetical protein; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.762 |
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