STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORB40555.1Patatin; Derived by automated computational analysis using gene prediction method: Protein Homology. (285 aa)    
Predicted Functional Partners:
ORB40789.1
Class II glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.737
ORB43610.1
Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.585
ORB39607.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.571
ORB40554.1
Zinc-binding dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.494
ORB41900.1
Glycerol-3-phosphate acyltransferase; PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPAT/DAPAT family.
  
  
  0.490
ORB40713.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.466
ORB39470.1
TVP38/TMEM64 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.439
ORB41901.1
Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.434
ORB41406.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.427
psd
Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).
    
  0.417
Your Current Organism:
Mycolicibacterium porcinum
NCBI taxonomy Id: 39693
Other names: ATCC 33776, CCUG 37674, CIP 105392, DSM 44242, JCM 6378, M. porcinum, Mycobacterium porcinum, strain E10241-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.