| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| ORB37616.1 | ORB40173.1 | BST41_22625 | BST41_14580 | Integration host factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.775 |
| ORB37616.1 | rplB | BST41_22625 | BST41_00670 | Integration host factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.963 |
| ORB37616.1 | rplM | BST41_22625 | BST41_01410 | Integration host factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.973 |
| ORB37616.1 | rplT | BST41_22625 | BST41_18970 | Integration host factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.961 |
| ORB37616.1 | rpmI | BST41_22625 | BST41_18975 | Integration host factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family. | 0.961 |
| ORB37616.1 | rpsD | BST41_22625 | BST41_01250 | Integration host factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.980 |
| ORB37616.1 | rpsE | BST41_22625 | BST41_00925 | Integration host factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.980 |
| ORB37616.1 | rpsL | BST41_22625 | BST41_00490 | Integration host factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.980 |
| ORB40173.1 | ORB37616.1 | BST41_14580 | BST41_22625 | Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Integration host factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.775 |
| ORB40173.1 | ORB40194.1 | BST41_14580 | BST41_15335 | Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.816 |
| ORB40173.1 | rplB | BST41_14580 | BST41_00670 | Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | 0.780 |
| ORB40173.1 | rplM | BST41_14580 | BST41_01410 | Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly. | 0.782 |
| ORB40173.1 | rplT | BST41_14580 | BST41_18970 | Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit. | 0.775 |
| ORB40173.1 | rpmI | BST41_14580 | BST41_18975 | Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family. | 0.778 |
| ORB40173.1 | rpsD | BST41_14580 | BST41_01250 | Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit. | 0.809 |
| ORB40173.1 | rpsE | BST41_14580 | BST41_00925 | Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family. | 0.787 |
| ORB40173.1 | rpsL | BST41_14580 | BST41_00490 | Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit. | 0.780 |
| ORB40173.1 | rpsM | BST41_14580 | BST41_01240 | Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family. | 0.775 |
| ORB40194.1 | ORB40173.1 | BST41_15335 | BST41_14580 | Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology. | Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.816 |
| rplB | ORB37616.1 | BST41_00670 | BST41_22625 | 50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family. | Integration host factor; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.963 |
