STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORB40006.1Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (205 aa)    
Predicted Functional Partners:
ORB44951.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.873
ORB40005.1
(2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.827
ORB40189.1
acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   0.799
ORB40055.1
Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.789
ORB40056.1
Urea amidolyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.762
ORB36520.1
Cysteine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.649
ORB39952.1
Cysteine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.645
ORB41816.1
Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
  0.631
ORB33697.1
Short chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.578
ORB34991.1
Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.
  
 
 0.572
Your Current Organism:
Mycolicibacterium porcinum
NCBI taxonomy Id: 39693
Other names: ATCC 33776, CCUG 37674, CIP 105392, DSM 44242, JCM 6378, M. porcinum, Mycobacterium porcinum, strain E10241-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.