STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORB39464.1Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (289 aa)    
Predicted Functional Partners:
ORB34690.1
Asp/Glu/hydantoin racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.693
ORB39465.1
MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.655
ORB41182.1
Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
  0.642
ORB38167.1
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.638
ORB35428.1
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.634
ORB45075.1
Allantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.560
ORB34688.1
Allantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.560
ORB41183.1
Dihydropyrimidinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.546
ORB38506.1
Dihydropyrimidinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.546
ORB42769.1
1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
     
 0.545
Your Current Organism:
Mycolicibacterium porcinum
NCBI taxonomy Id: 39693
Other names: ATCC 33776, CCUG 37674, CIP 105392, DSM 44242, JCM 6378, M. porcinum, Mycobacterium porcinum, strain E10241-1
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