STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORB39512.1DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (123 aa)    
Predicted Functional Partners:
ORB39511.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.799
ORB39508.1
DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.760
ORB39509.1
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.733
ORB39510.1
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.728
ORB40069.1
Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.706
ORB39570.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.668
htpX
Protease HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.
   
  
 0.652
ORB39513.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.620
ORB44979.1
ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.579
ORB43664.1
TIGR03085 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.554
Your Current Organism:
Mycolicibacterium porcinum
NCBI taxonomy Id: 39693
Other names: ATCC 33776, CCUG 37674, CIP 105392, DSM 44242, JCM 6378, M. porcinum, Mycobacterium porcinum, strain E10241-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.