STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORB38904.1Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (511 aa)    
Predicted Functional Partners:
ORB38905.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ORB38896.1
Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.727
ORB38903.1
Aspartate aminotransferase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.688
ORB38901.1
BMC domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.629
ORB38897.1
Microcompartment protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.598
ORB41245.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.593
ORB41678.1
Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.590
ORB36199.1
Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.586
ORB38902.1
Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.577
ORB38899.1
Ethanolamine utilization protein EutN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.574
Your Current Organism:
Mycolicibacterium porcinum
NCBI taxonomy Id: 39693
Other names: ATCC 33776, CCUG 37674, CIP 105392, DSM 44242, JCM 6378, M. porcinum, Mycobacterium porcinum, strain E10241-1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.