STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ORB39004.14-hydroxyacetophenone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology. (638 aa)    
Predicted Functional Partners:
ORB39003.1
Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.803
BST41_07615
Taurine catabolism dioxygenase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.669
ORB44690.1
Acetyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.643
ORB42453.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.555
ORB40791.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.555
BST41_17810
uracil-DNA glycosylase; Incomplete; partial in the middle of a contig; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.555
ORB33609.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.555
ORB33887.1
Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
  0.498
ORB40000.1
Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.473
ORB42823.1
Cyclohexanone monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.472
Your Current Organism:
Mycolicibacterium porcinum
NCBI taxonomy Id: 39693
Other names: ATCC 33776, CCUG 37674, CIP 105392, DSM 44242, JCM 6378, M. porcinum, Mycobacterium porcinum, strain E10241-1
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