STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
crgACell division protein CrgA; Involved in cell division; Belongs to the CrgA family. (94 aa)    
Predicted Functional Partners:
ORB37794.1
Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.917
ORB38637.1
Cell wall synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.899
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
    
 
 0.888
cwsA
Cell wall synthesis protein CwsA; Required for regulated cell division, cell wall synthesis and the maintenance of cell shape; Belongs to the CwsA family.
    
 
 0.888
ORB38649.1
Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.850
ftsQ
Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.
  
 
 
 0.841
ORB37797.1
Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
ORB37798.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.766
ORB37800.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.749
whiA
DNA-binding protein WhiA; Involved in cell division and chromosome segregation.
      
 0.722
Your Current Organism:
Mycolicibacterium porcinum
NCBI taxonomy Id: 39693
Other names: ATCC 33776, CCUG 37674, CIP 105392, DSM 44242, JCM 6378, M. porcinum, Mycobacterium porcinum, strain E10241-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.