STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ORB37307.1Propanediol utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (110 aa)    
Predicted Functional Partners:
ORB37394.1
Propanediol dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.994
ORB44596.1
Propanediol utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.979
ORB44658.1
Propanediol dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.976
pduC
Propanediol dehydratase; With pduED catalyzes the formation of propionaldehyde from 1,2-propanediol; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.973
ORB37306.1
Diol dehydratase reactivase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.948
ORB45032.1
pduH protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.933
ORB44597.1
Diol dehydratase reactivase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.898
ORB44501.1
CDP-alcohol phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.689
ORB44592.1
ATP--cob(I)alamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.675
ORB38898.1
Ethanolamine utilization protein; involved in the degredation of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.658
Your Current Organism:
Mycolicibacterium porcinum
NCBI taxonomy Id: 39693
Other names: ATCC 33776, CCUG 37674, CIP 105392, DSM 44242, JCM 6378, M. porcinum, Mycobacterium porcinum, strain E10241-1
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