STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720335_01451Unannotated protein. (630 aa)    
Predicted Functional Partners:
GCA_000720335_03891
Unannotated protein.
 
 0.983
GCA_000720335_03888
Unannotated protein.
 0.925
GCA_000720335_03082
Unannotated protein.
 0.907
GCA_000720335_01341
Unannotated protein.
 0.898
GCA_000720335_01397
Unannotated protein.
  
 
 0.849
GCA_000720335_01058
Unannotated protein.
  
 
 0.828
GCA_000720335_02035
Unannotated protein.
  
 
 0.780
GCA_000720335_00588
Unannotated protein.
 
 0.720
GCA_000720335_02697
Unannotated protein.
 
  
 0.662
GCA_000720335_03892
Unannotated protein.
 
  
 0.657
Your Current Organism:
Marmoricola aequoreus
NCBI taxonomy Id: 397278
Other names: JCM 13812, M. aequoreus, Marmoricola aequoreus Lee 2007, NRRL B-24464, strain SST-45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.