STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720335_01600Unannotated protein. (213 aa)    
Predicted Functional Partners:
GCA_000720335_02054
Unannotated protein.
    
 0.791
GCA_000720335_00048
Unannotated protein.
    
 0.766
GCA_000720335_00863
Unannotated protein.
  
 
 0.711
GCA_000720335_02465
Unannotated protein.
    
  0.698
GCA_000720335_01913
Unannotated protein.
  
  
  0.668
GCA_000720335_01488
Unannotated protein.
     
 0.660
GCA_000720335_03860
Unannotated protein.
    
  0.623
GCA_000720335_01601
Unannotated protein.
       0.567
GCA_000720335_01602
Unannotated protein.
       0.563
GCA_000720335_01603
Unannotated protein.
       0.563
Your Current Organism:
Marmoricola aequoreus
NCBI taxonomy Id: 397278
Other names: JCM 13812, M. aequoreus, Marmoricola aequoreus Lee 2007, NRRL B-24464, strain SST-45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.