STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720335_02502Unannotated protein. (297 aa)    
Predicted Functional Partners:
GCA_000720335_02501
Unannotated protein.
 
     0.952
GCA_000720335_02500
Unannotated protein.
       0.784
GCA_000720335_01541
Unannotated protein.
 
    0.769
GCA_000720335_01433
Unannotated protein.
 
    0.733
GCA_000720335_00504
Unannotated protein.
 
     0.731
GCA_000720335_02503
Unannotated protein.
       0.682
GCA_000720335_00503
Unannotated protein.
 
     0.664
GCA_000720335_00689
Unannotated protein.
 
   
 0.664
GCA_000720335_02498
Unannotated protein.
  
    0.649
GCA_000720335_02499
Unannotated protein.
  
    0.649
Your Current Organism:
Marmoricola aequoreus
NCBI taxonomy Id: 397278
Other names: JCM 13812, M. aequoreus, Marmoricola aequoreus Lee 2007, NRRL B-24464, strain SST-45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.