STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000720335_03234Unannotated protein. (240 aa)    
Predicted Functional Partners:
GCA_000720335_03235
Unannotated protein.
 
     0.957
GCA_000720335_03233
Unannotated protein.
 
     0.948
GCA_000720335_03236
Unannotated protein.
 
     0.817
GCA_000720335_01166
Unannotated protein.
     
 0.728
GCA_000720335_03230
Unannotated protein.
       0.693
GCA_000720335_03231
Unannotated protein.
       0.693
GCA_000720335_03232
Unannotated protein.
       0.693
GCA_000720335_03327
Unannotated protein.
  
 
 
0.661
GCA_000720335_00563
Unannotated protein.
    
  0.625
GCA_000720335_00629
Unannotated protein.
    
  0.625
Your Current Organism:
Marmoricola aequoreus
NCBI taxonomy Id: 397278
Other names: JCM 13812, M. aequoreus, Marmoricola aequoreus Lee 2007, NRRL B-24464, strain SST-45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.