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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_00183NADPH-dependent butanol dehydrogenase. (393 aa)    
Predicted Functional Partners:
C807_00386
Propionaldehyde dehydrogenase.
 0.998
C807_02744
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.988
C807_02186
Hypothetical protein; Belongs to the aldehyde dehydrogenase family.
 
 0.894
C807_00426
Hypothetical protein.
   
 0.810
C807_03744
butyryl-CoA dehydrogenase.
  
 
 0.680
glgA
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
  
 0.678
C807_02523
Hypothetical protein.
  
 0.666
ackA
Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.
  
 
 0.657
C807_03745
3-hydroxybutyryl-CoA dehydrogenase.
  
 
 0.655
C807_03747
acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.650
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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