close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsARibose transport system ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family. (497 aa)    
Predicted Functional Partners:
C807_00430
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 0.978
C807_00428
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 0.963
C807_00563
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.918
C807_03244
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 0.918
C807_00431
Hypothetical protein.
 
 0.916
C807_02178
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 0.912
C807_03785
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 0.911
C807_02446
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 0.909
C807_03229
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.904
C807_00273
Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family.
 0.882
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.