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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_00599Oxaloacetate decarboxylase, alpha subunit. (475 aa)    
Predicted Functional Partners:
C807_00598
Sodium ion-translocating decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
 
 
 0.998
C807_00597
Hypothetical protein.
 
 
 0.993
C807_02744
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
  
 
 0.986
C807_03630
Pyruvate kinase; Belongs to the pyruvate kinase family.
  
 
 0.948
C807_00621
Phosphoenolpyruvate carboxykinase (ATP).
 
  
 0.944
C807_01245
Malate dehydrogenase (oxaloacetate-decarboxylating).
    
 0.943
C807_01559
Pyruvate, phosphate dikinase.
    
 0.939
C807_03614
Hydrolyase, tartrate alpha subunit/fumarate domain-containing protein, Fe-S type.
    
 0.939
leuD
2,3-dimethylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.
   
 
 0.938
C807_03615
Hydrolyase, tartrate beta subunit/fumarate domain-containing protein, Fe-S type.
    
 0.936
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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