close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_00854Stage III sporulation protein AE. (378 aa)    
Predicted Functional Partners:
C807_00853
Stage III sporulation protein AD.
 
  
 0.996
C807_00852
Stage III sporulation protein AC.
 
  
 0.985
C807_00856
Stage III sporulation protein AG.
 
  
 0.982
C807_00851
Stage III sporulation protein AB.
 
  
 0.974
C807_00857
Hypothetical protein.
 
  
 0.974
C807_00850
Stage III sporulation protein AA.
 
  
 0.972
C807_03086
Sporulation transcriptional regulator SpoIIID.
  
    0.947
C807_01634
Stage II sporulation protein P.
  
   
 0.848
C807_02735
Sporulation protein YabP.
  
    0.781
C807_01280
Sporulation protein YqfC.
  
    0.777
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.