C807_01021 protein (Lachnospiraceae bacterium 284)

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Score

C807_01021

RNA-binding protein. (96 aa)

Predicted Functional Partners:

nadD

0.967

rsfS

0.888

C807_01023

0.878

obg

0.845

rplK

0.808

C807_01018

0.744

rpmA

0.680

rplU

0.679

aroE

0.537

C807_01124

0.507

Your Current Organism:

Lachnospiraceae bacterium 284

NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C807_01018	C807_01021	C807_01018	C807_01021	Hypothetical protein.	RNA-binding protein.	0.744
C807_01018	C807_01023	C807_01018	C807_01023	Hypothetical protein.	Hypothetical protein.	0.517
C807_01018	nadD	C807_01018	C807_01022	Hypothetical protein.	Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	0.563
C807_01018	obg	C807_01018	C807_01020	Hypothetical protein.	GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	0.691
C807_01018	rplK	C807_01018	C807_03923	Hypothetical protein.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.502
C807_01018	rplU	C807_01018	C807_01017	Hypothetical protein.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.990
C807_01018	rpmA	C807_01018	C807_01019	Hypothetical protein.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.997
C807_01018	rsfS	C807_01018	C807_01024	Hypothetical protein.	Iojap-like ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.566
C807_01021	C807_01018	C807_01021	C807_01018	RNA-binding protein.	Hypothetical protein.	0.744
C807_01021	C807_01023	C807_01021	C807_01023	RNA-binding protein.	Hypothetical protein.	0.878
C807_01021	C807_01124	C807_01021	C807_01124	RNA-binding protein.	Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.	0.507
C807_01021	aroE	C807_01021	C807_00463	RNA-binding protein.	Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).	0.537
C807_01021	nadD	C807_01021	C807_01022	RNA-binding protein.	Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).	0.967
C807_01021	obg	C807_01021	C807_01020	RNA-binding protein.	GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.	0.845
C807_01021	rplK	C807_01021	C807_03923	RNA-binding protein.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.808
C807_01021	rplU	C807_01021	C807_01017	RNA-binding protein.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.679
C807_01021	rpmA	C807_01021	C807_01019	RNA-binding protein.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.680
C807_01021	rsfS	C807_01021	C807_01024	RNA-binding protein.	Iojap-like ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.888
C807_01023	C807_01018	C807_01023	C807_01018	Hypothetical protein.	Hypothetical protein.	0.517
C807_01023	C807_01021	C807_01023	C807_01021	Hypothetical protein.	RNA-binding protein.	0.878