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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_01055Rod shape-determining protein MreD. (172 aa)    
Predicted Functional Partners:
C807_01056
Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape.
 
 
 0.997
minC
Hypothetical protein; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.
 
  
 0.974
C807_01054
Hypothetical protein.
 
  
 0.958
C807_01057
MreB/Mrl family cell shape determining protein.
  
  
 0.914
C807_01052
Septum site-determining protein MinD.
  
  
 0.878
C807_01058
DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.823
C807_01050
Hypothetical protein; Belongs to the SEDS family.
 
  
 0.786
C807_01046
Hypothetical protein.
 
     0.772
C807_01941
Hypothetical protein.
 
     0.748
C807_01374
Hypothetical protein.
  
     0.734
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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