Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C807_00893 | C807_01115 | C807_00893 | C807_01115 | Hypothetical protein. | Ribose-phosphate diphosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | 0.869 |
C807_00893 | deoB | C807_00893 | C807_00096 | Hypothetical protein. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.943 |
C807_01001 | C807_01115 | C807_01001 | C807_01115 | Hypothetical protein. | Ribose-phosphate diphosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | 0.869 |
C807_01001 | deoB | C807_01001 | C807_00096 | Hypothetical protein. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.934 |
C807_01115 | C807_00893 | C807_01115 | C807_00893 | Ribose-phosphate diphosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Hypothetical protein. | 0.869 |
C807_01115 | C807_01001 | C807_01115 | C807_01001 | Ribose-phosphate diphosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Hypothetical protein. | 0.869 |
C807_01115 | C807_01974 | C807_01115 | C807_01974 | Ribose-phosphate diphosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Hypothetical protein. | 0.962 |
C807_01115 | C807_03202 | C807_01115 | C807_03202 | Ribose-phosphate diphosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | RpiB/LacA/LacB family sugar-phosphate isomerase. | 0.882 |
C807_01115 | deoB | C807_01115 | C807_00096 | Ribose-phosphate diphosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.867 |
C807_01115 | hisG | C807_01115 | C807_00991 | Ribose-phosphate diphosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily. | 0.887 |
C807_01115 | hisZ | C807_01115 | C807_00990 | Ribose-phosphate diphosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | ATP phosphoribosyltransferase, regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine. | 0.870 |
C807_01115 | pyrE | C807_01115 | C807_01386 | Ribose-phosphate diphosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP). | 0.876 |
C807_01115 | rbsK | C807_01115 | C807_00378 | Ribose-phosphate diphosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.949 |
C807_01115 | rbsK-2 | C807_01115 | C807_00379 | Ribose-phosphate diphosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.887 |
C807_01974 | C807_01115 | C807_01974 | C807_01115 | Hypothetical protein. | Ribose-phosphate diphosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | 0.962 |
C807_01974 | C807_03202 | C807_01974 | C807_03202 | Hypothetical protein. | RpiB/LacA/LacB family sugar-phosphate isomerase. | 0.744 |
C807_01974 | rbsK | C807_01974 | C807_00378 | Hypothetical protein. | Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.616 |
C807_03202 | C807_01115 | C807_03202 | C807_01115 | RpiB/LacA/LacB family sugar-phosphate isomerase. | Ribose-phosphate diphosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | 0.882 |
C807_03202 | C807_01974 | C807_03202 | C807_01974 | RpiB/LacA/LacB family sugar-phosphate isomerase. | Hypothetical protein. | 0.744 |
C807_03202 | deoB | C807_03202 | C807_00096 | RpiB/LacA/LacB family sugar-phosphate isomerase. | Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. | 0.937 |
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