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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_01366Hypothetical protein. (401 aa)    
Predicted Functional Partners:
C807_02745
Hypothetical protein.
  
 
 0.749
C807_02563
Hypothetical protein.
    
 0.674
C807_04033
HK97 family phage major capsid protein.
   
    0.664
C807_00382
Hypothetical protein.
  
 
 0.632
pyrK
Hypothetical protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).
  
  
 0.620
C807_01365
Hypothetical protein.
  
  
 0.616
C807_03744
butyryl-CoA dehydrogenase.
    
 0.607
C807_00360
Hypothetical protein.
  
 
 0.596
C807_00623
Hypothetical protein.
   
 
 0.558
C807_01286
ferredoxin-NADP+ reductase.
     
 0.544
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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