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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_01559Pyruvate, phosphate dikinase. (872 aa)    
Predicted Functional Partners:
C807_02744
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
 0.987
C807_03630
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.956
C807_00621
Phosphoenolpyruvate carboxykinase (ATP).
     
 0.944
eno
Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.
    
 0.941
C807_01245
Malate dehydrogenase (oxaloacetate-decarboxylating).
  
 
 0.941
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.941
C807_00599
Oxaloacetate decarboxylase, alpha subunit.
    
 0.939
C807_00598
Sodium ion-translocating decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).
    
 0.937
C807_03293
Hypothetical protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.937
deoC
Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.
    
  0.933
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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