mrnC protein (Lachnospiraceae bacterium 284)

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mrnC

Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family. (146 aa)

Predicted Functional Partners:

cysS

0.983

C807_01626

0.968

C807_01629

0.882

rplC

0.831

C807_01624

0.814

rpmA

0.785

rplU

0.755

rpmG

0.751

rplJ

0.749

C807_00880

0.747

Your Current Organism:

Lachnospiraceae bacterium 284

NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C807_00880	mrnC	C807_00880	C807_01627	Hypothetical protein.	Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.747
C807_00880	rplC	C807_00880	C807_03856	Hypothetical protein.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.855
C807_00880	rplJ	C807_00880	C807_03920	Hypothetical protein.	Large subunit ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.	0.847
C807_00880	rplU	C807_00880	C807_01017	Hypothetical protein.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.721
C807_00880	rpmA	C807_00880	C807_01019	Hypothetical protein.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.721
C807_00880	rpmG	C807_00880	C807_03926	Hypothetical protein.	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.725
C807_01624	C807_01626	C807_01624	C807_01626	RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family.	RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.843
C807_01624	C807_01629	C807_01624	C807_01629	RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family.	Serine O-acetyltransferase.	0.549
C807_01624	cysS	C807_01624	C807_01628	RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family.	cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.621
C807_01624	mrnC	C807_01624	C807_01627	RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family.	Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.814
C807_01626	C807_01624	C807_01626	C807_01624	RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family.	0.843
C807_01626	C807_01629	C807_01626	C807_01629	RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Serine O-acetyltransferase.	0.657
C807_01626	cysS	C807_01626	C807_01628	RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.	0.948
C807_01626	mrnC	C807_01626	C807_01627	RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	Hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.	0.968
C807_01626	rplC	C807_01626	C807_03856	RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.793
C807_01626	rplU	C807_01626	C807_01017	RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.778
C807_01626	rpmA	C807_01626	C807_01019	RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.631
C807_01626	rpmG	C807_01626	C807_03926	RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.	0.735
C807_01629	C807_01624	C807_01629	C807_01624	Serine O-acetyltransferase.	RNA polymerase sigma-H factor; Belongs to the sigma-70 factor family.	0.549
C807_01629	C807_01626	C807_01629	C807_01626	Serine O-acetyltransferase.	RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.	0.657

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