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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_01645Hypothetical protein. (401 aa)    
Predicted Functional Partners:
cinA
Competence/damage-inducible protein CinA domain; Belongs to the CinA family.
     
 0.874
guaB
Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.832
C807_01163
Hypothetical protein.
 
  
 0.701
C807_03715
YD repeat (two copies).
  
 
 0.694
C807_04034
Hypothetical protein.
   
 
 0.691
C807_01305
Hypothetical protein; Belongs to the peptidase S8 family.
 
 0.679
C807_04033
HK97 family phage major capsid protein.
   
   0.678
C807_04031
HK97 family phage portal protein.
   
   0.677
C807_04035
Hypothetical protein.
   
   0.677
C807_00671
Flagellar motor switch protein FliN.
   
 
 0.657
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
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