STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C807_01932Hypothetical protein. (169 aa)    
Predicted Functional Partners:
C807_02744
Pyruvate:ferredoxin (flavodoxin) oxidoreductase.
    
  0.947
C807_01933
Hypothetical protein.
       0.773
C807_01810
Chorismate mutase.
    
  0.721
C807_02785
Hypothetical protein.
  
     0.688
C807_03483
Hypothetical protein.
  
     0.664
C807_02182
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase.
    
  0.564
C807_02309
Pseudaminic acid biosynthesis-associated protein PseG.
  
 
 0.546
argD
Acetylornithine/succinylornithine family transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
   
 
 0.513
hisC
Histidinol-phosphate transaminase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.
    
  0.492
C807_02454
Hypothetical protein.
  
     0.490
Your Current Organism:
Lachnospiraceae bacterium 284
NCBI taxonomy Id: 397287
Other names: L. bacterium 28-4, Lachnospiraceae bacterium 28-4
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.